Index

A

above_thr() (in module deepfinder.utils.objl)

B

bin() (in module deepfinder.utils.smap)

bin_array() (in module deepfinder.utils.common)

C

Cluster (class in deepfinder.inference)

D

deepfinder.utils.common (module) deepfinder.utils.objl (module)

deepfinder.utils.smap (module) disp() (in module deepfinder.utils.objl)

G

generate_with_shapes() (deepfinder.training.TargetBuilder method) generate_with_spheres() (deepfinder.training.TargetBuilder method) get_class() (in module deepfinder.utils.objl)

get_labels() (in module deepfinder.utils.objl) get_obj() (in module deepfinder.utils.objl) get_tomo() (in module deepfinder.utils.objl)

L

launch() (deepfinder.inference.Cluster method) (deepfinder.inference.Segment method) (deepfinder.training.Train method)

P

plot_volume_orthoslices() (in module deepfinder.utils.common)

R

read() (in module deepfinder.utils.objl) read_array() (in module deepfinder.utils.common)

read_h5() (in module deepfinder.utils.smap) remove_class() (in module deepfinder.utils.objl) remove_obj() (in module deepfinder.utils.objl)

S

scale_coord() (in module deepfinder.utils.objl)

Segment (class in deepfinder.inference)

T

TargetBuilder (class in deepfinder.training)

to_labelmap() (in module deepfinder.utils.smap) Train (class in deepfinder.training)

W

write() (in module deepfinder.utils.objl)

write_array() (in module deepfinder.utils.common) write_h5() (in module deepfinder.utils.smap)